Water-Based Wood Stain + Varnish Finish — Step-by-Step

Water-based wood stain — properties, application, and a varnish topcoat

Alongside oil stain, water-based stain is one of the standard finishes in DIY woodworking. This article covers:
What water-based stain is and isn’t
How to apply it
using Washi Paint’s “Pore Stain” as the example.

Water-based stain typically needs a varnish topcoat. I used Washi Paint’s “Water-Based Urethane Varnish”. → I also compared “clear gloss” and “clear matte”.

Washi Paint Pore Stain and Water-Based Urethane Varnish
Washi Paint Pore Stain & Water-Based Urethane Varnish

Washi Paint Water-Based Urethane Varnish, Clear, 130mL — for indoor wood, urethane resin, low odor / fast drying

Washi Paint Water-Based Pore Stain, Oak, 300mL

Washi Paint Water-Based Pore Stain, Blue, 300mL

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What Water-Based Stain Is

Main characteristics:

Preserves the wood grain
It’s a stain that soaks into the wood, so the grain remains visible.

Generally needs a topcoat varnish (some products are self-sealing)
Without a topcoat, color can transfer onto whatever touches it. Most water-based stains need to be sealed with varnish. If you want to preserve the natural-wood feel as much as possible, oil stain (Watco Oil, Briwax) is a better fit.

Easy to handle
The solvent is water — you can thin it with water and rinse the brushes with water. Handles like watercolor paint. Fairly fast drying too.

No fumes
No paint thinner, so no fumes during application or drying.

Wider color range
Includes colors that oil stain doesn’t have — like blue.
I used a blue water-based stain on my DIY guitar build (Japanese article available; English version forthcoming).

How to Apply Water-Based Stain

<What I used here>
・Washi Paint Pore Stain (Oak)
・Washi Paint Water-Based Urethane Varnish (“clear gloss” and “clear matte”)

Big picture: brush the stain on, then topcoat with varnish.

Stain steps: ① through ⑤ below
Varnish steps: ⑥ through ⑨ below

For the varnish step, lightly sanding between coats gives a much nicer finish. Try it.
※ Bonus: a smoother surface means it’s easier to keep clean — a Swiffer / dust sweeper won’t catch on rough spots.

What You Need

<Required>
・Brush
・Cloth (rag)
・Sandpaper (around #240–#400)

<Nice to have>
・Gloves (rubber or vinyl, paint-impermeable)
・Sandpaper around #800

Tools and materials for staining

① Sand the wood (#240–400)

First, prep the surface with sandpaper.
#240–#400, sand with the grain.

Sanding wood with sandpaper

② Brush on the stain

Brush the water-based stain onto the wood.
I used “Pore Stain” in Oak.

A small hassle, but I’d recommend wearing gloves. Water-based stain is easier to wash off than oil stain, but still no fun on your skin.

Brushing stain onto wood

③ Wipe off excess stain with a cloth

Wipe off any stain that hasn’t soaked in.

④ Re-coat (optional)

For deeper color, let the first coat dry and apply another.

⑤ Let dry — stain is done

Once dry, the stain step is complete.
Water-based stain typically needs a varnish topcoat next.

Stained wood, dry

⑥ Apply varnish (first coat)

Apply varnish with a brush.
Multiple thin coats look much better than one heavy coat.
Don’t overload the brush, and move slowly to avoid creating bubbles.

Left side in the photos = “clear gloss”; right side = “clear matte”.

⑦ Light sand between coats

Once the first varnish coat is dry, lightly sand before the next coat. (#400–#800)

Run your hand across the surface — you’ll feel rough spots in places.
Lightly sand mainly those rough spots.

Sand a little, run your hand over to check, sand again. The sanded spots may look whitish — that’s fine.
When done, wipe off the sanding dust with a clean rag.

⑧ Recoat varnish

Apply more varnish.

Coat → dry → light sand → coat

Repeat until you’re happy with the surface. Stop on a coat (no sanding after the final coat).

Final varnish coat

⑨ Done — “Clear Gloss” vs “Clear Matte” comparison

Result of finishing with “clear gloss” vs “clear matte” Water-Based Urethane Varnish. The walkthrough was on pine glue-laminated panel; I also did the same process on SPF lumber.

■ Pine glue-laminated panel + water-based stain + varnish
Left = clear gloss, right = clear matte.

Pine panel: clear gloss vs clear matte
Left: Clear Gloss / Right: Clear Matte (pine glue-laminated panel)

■ SPF + water-based stain + varnish
Left = clear gloss, right = clear matte.

SPF: clear gloss vs clear matte
Left: Clear Gloss / Right: Clear Matte (SPF)

That’s the water-based stain + varnish workflow.
Hope it was useful.

Honestly, finishing is one of the most fun parts of DIY for me.
This was water-based; I’d encourage you to try oil-based (“oil stain”) too — it’s its own thing.

I have a separate article on Watco Oil (oil stain) finishing — see that next (Japanese version available; English version forthcoming).

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